Pseudomonas protegens Pf-5, PFL_5622 (trpD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0000162 tryptophan biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR43285
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004048 anthranilate phosphoribosyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PTHR43285
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016757 transferase activity, transferring glycosyl groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00591
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pfl01230 Biosynthesis of amino acids 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfl01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfl01110 Biosynthesis of secondary metabolites 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfl01130 Biosynthesis of antibiotics 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pfl00400 Phenylalanine, tyrosine and tryptophan biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR01245 JCVI: anthranilate phosphoribosyltransferase IPR005940 Anthranilate phosphoribosyl transferase 8 337 3.8E-121
FunFam G3DSA:1.20.970.10:FF:000006 Anthranilate phosphoribosyltransferase - - 1 70 7.9E-28
SUPERFAMILY SSF52418 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily 75 340 1.44E-87
Gene3D G3DSA:3.40.1030.10 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily 73 347 6.9E-105
PANTHER PTHR43285 ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE IPR005940 Anthranilate phosphoribosyl transferase 2 339 4.8E-109
Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. IPR005940 Anthranilate phosphoribosyl transferase 5 339 37.091995
Pfam PF00591 Glycosyl transferase family, a/b domain IPR000312 Glycosyl transferase, family 3 76 329 1.9E-97
Gene3D G3DSA:1.20.970.10 Transferase, Pyrimidine Nucleoside Phosphorylase; Chain C - - 1 70 2.6E-27
SUPERFAMILY SSF47648 Nucleoside phosphorylase/phosphoribosyltransferase N-terminal domain IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily 1 69 7.59E-21
Pfam PF02885 Glycosyl transferase family, helical bundle domain IPR017459 Glycosyl transferase family 3, N-terminal domain 9 65 7.4E-19
FunFam G3DSA:3.40.1030.10:FF:000002 Anthranilate phosphoribosyltransferase - - 72 344 2.1E-102

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.