Pseudomonas protegens Pf-5, PFL_6168

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_6168
Name
Replicon chromosome
Genomic location 7006510 - 7007922 (+ strand)

Cross-References

RefSeq YP_263226.1
GI 70733451
Entrez 3480538
INSDC AAY95356.1
NCBI Locus Tag PFL_6168
UniParc UPI000054E2CE
UniProtKB Acc Q4K3F7
UniProtKB ID Q4K3F7_PSEF5
UniRef100 UniRef100_Q4K3F7
UniRef50 UniRef50_I2BWB7
UniRef90 UniRef90_Q4K3F7

Product

Feature Type CDS
Coding Frame 1
Product Name
putrescine:hydrogen symporter, PuuP family
Synonyms
Evidence for Translation
Charge (pH 7) 6.12
Kyte-Doolittle Hydrophobicity Value 0.865
Molecular Weight (kDa) 49541.8
Isoelectric Point (pI) 9.40

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 433 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000219 (3043 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_6168

Human Homologs

References

No references are associated with this feature.