Pseudomonas protegens CHA0, PFLCHA0_c07420 (xanP1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00860
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03173
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015851 nucleobase transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03173
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR03173
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam NF037981 NCBIFAM: purine/pyrimidine permease - - 25 437 6.6E-13
PANTHER PTHR42810 PURINE PERMEASE C1399.01C-RELATED - - 6 452 0.0
NCBIfam TIGR03173 JCVI: xanthine permease IPR017588 Uric acid permease UacT-like 28 443 5.1E-128
Pfam PF00860 Permease family IPR006043 Nucleobase cation symporter 2 family 25 411 5.0E-92
NCBIfam TIGR00801 JCVI: NCS2 family nucleobase:cation symporter IPR006042 Xanthine/uracil permease 20 440 3.0E-111

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.