Pseudomonas protegens CHA0, PFLCHA0_c07550 (yfiB)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:PR01021	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SUPERFAMILY	SSF103088	OmpA-like	IPR036737	OmpA-like domain superfamily	47	161	1.44E-30
PRINTS	PR01021	OMPA domain signature	IPR006664	Outer membrane protein, bacterial	91	106	9.0E-10
Pfam	PF00691	OmpA family	IPR006665	OmpA-like domain	61	155	1.5E-18
Gene3D	G3DSA:3.30.1330.60	-	IPR036737	OmpA-like domain superfamily	30	163	4.2E-35
PRINTS	PR01023	Sodium-type flagellar protein MotY precursor signature	-	-	144	164	1.6E-5
PRINTS	PR01023	Sodium-type flagellar protein MotY precursor signature	-	-	124	143	1.6E-5
PRINTS	PR01021	OMPA domain signature	IPR006664	Outer membrane protein, bacterial	61	83	9.0E-10
PANTHER	PTHR30329	STATOR ELEMENT OF FLAGELLAR MOTOR COMPLEX	-	-	43	162	2.2E-29
FunFam	G3DSA:3.30.1330.60:FF:000029	Outer membrane protein OmpA	-	-	30	163	6.0E-89
PRINTS	PR01023	Sodium-type flagellar protein MotY precursor signature	-	-	106	123	1.6E-5
PRINTS	PR01021	OMPA domain signature	IPR006664	Outer membrane protein, bacterial	106	122	9.0E-10
CDD	cd07185	OmpA_C-like	IPR006665	OmpA-like domain	59	161	1.00791E-34

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.