Pseudomonas protegens CHA0, PFLCHA0_c28150 (pulE1)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0015627 type II protein secretion system complex
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02533
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0015628 protein secretion by the type II secretion system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02533
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02533
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pprc03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:3.30.450.90 - - - 77 210 6.3E-47
Gene3D G3DSA:3.30.300.160 - IPR037257 Type II secretion system protein GspE, N-terminal superfamily 1 76 1.2E-10
FunFam G3DSA:3.30.450.90:FF:000001 Type II secretion system ATPase GspE - - 78 210 1.4E-53
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 211 472 5.8E-108
SUPERFAMILY SSF160246 EspE N-terminal domain-like IPR037257 Type II secretion system protein GspE, N-terminal superfamily 3 65 9.42E-9
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 239 360 1.4E-5
CDD cd01129 PulE-GspE-like - - 230 378 3.06116E-91
Pfam PF00437 Type II/IV secretion system protein IPR001482 Type II/IV secretion system domain 112 378 2.4E-98
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 89 470 3.0E-101
FunFam G3DSA:3.40.50.300:FF:000398 Type IV pilus assembly ATPase PilB - - 211 472 7.4E-111
NCBIfam TIGR02533 JCVI: type II secretion system ATPase GspE IPR013369 Type II secretion system protein GspE 3 470 0.0
PANTHER PTHR30258 TYPE II SECRETION SYSTEM PROTEIN GSPE-RELATED - - 78 471 5.5E-124

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.