Pseudomonas protegens CHA0, PFLCHA0_c29480 (pvdQ)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0016787	hydrolase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PTHR34218	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	ISM Inferred from Sequence Model Term mapped from: InterPro:G3DSA:1.10.439.10	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0017000	antibiotic biosynthetic process	ISM Inferred from Sequence Model Term mapped from: InterPro:PTHR34218	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
Gene3D	G3DSA:2.30.120.10	-	IPR043146	Penicillin amidase type, N-terminal domain, B-knob	294	368	0.0
Pfam	PF01804	Penicillin amidase	IPR002692	Penicillin/GL-7-ACA/AHL/aculeacin-A acylase	34	755	9.5E-129
Gene3D	G3DSA:1.10.439.10	Penicillin Amidohydrolase, domain 1	IPR023343	Penicillin amidase type, domain 1	25	194	6.5E-63
Gene3D	G3DSA:1.10.1400.10	-	IPR043147	Penicillin amidase type, A-knob	511	695	0.0
CDD	cd01936	Ntn_CA	-	-	36	749	0.0
Gene3D	G3DSA:3.60.20.10	Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1	IPR029055	Nucleophile aminohydrolases, N-terminal	219	753	0.0
PANTHER	PTHR34218	PEPTIDASE S45 PENICILLIN AMIDASE	IPR002692	Penicillin/GL-7-ACA/AHL/aculeacin-A acylase	22	766	6.1E-123
SUPERFAMILY	SSF56235	N-terminal nucleophile aminohydrolases (Ntn hydrolases)	IPR029055	Nucleophile aminohydrolases, N-terminal	32	765	0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.