Pseudomonas protegens CHA0, PFLCHA0_c45010 (cobD)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Cellular Component	GO:0016020	membrane	ISM Inferred from Sequence Model Term mapped from: InterPro:PTHR34308	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0009236	cobalamin biosynthetic process	ISM Inferred from Sequence Model Term mapped from: InterPro:PTHR34308	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0048472	threonine-phosphate decarboxylase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:PTHR34308	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pprc00860	Porphyrin and chlorophyll metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pprc01100	Metabolic pathways	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
NCBIfam	TIGR00380	JCVI: adenosylcobinamide-phosphate synthase CbiB	IPR004485	Cobalamin biosynthesis CobD/CbiB	8	258	7.8E-56
Hamap	MF_00024	Cobalamin biosynthesis protein CbiB [cbiB].	IPR004485	Cobalamin biosynthesis CobD/CbiB	1	302	107.461693
Pfam	PF03186	CobD/Cbib protein	IPR004485	Cobalamin biosynthesis CobD/CbiB	8	282	8.6E-96
Pfam	PF17113	Regulatory signalling modulator protein AmpE	IPR031347	Protein AmpE	126	223	1.8E-6
PANTHER	PTHR34308	COBALAMIN BIOSYNTHESIS PROTEIN CBIB	IPR004485	Cobalamin biosynthesis CobD/CbiB	4	296	1.2E-100

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.