Pseudomonas protegens CHA0, PFLCHA0_c50100 (cyoC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0022904 respiratory electron transport chain
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.20.120.80
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0016020 membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF81452
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0009055 electron transfer activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF81452
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0019646 aerobic electron transport chain
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02842
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004129 cytochrome-c oxidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00510
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0009486 cytochrome bo3 ubiquinol oxidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02842
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pprc00190 Oxidative phosphorylation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pprc01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF81452 Cytochrome c oxidase subunit III-like IPR035973 Cytochrome c oxidase subunit III-like superfamily 12 206 1.1E-58
FunFam G3DSA:1.20.120.80:FF:000001 Cytochrome (Ubi)quinol oxidase subunit III - - 23 208 1.5E-69
Pfam PF00510 Cytochrome c oxidase subunit III IPR000298 Cytochrome c oxidase subunit III-like 29 206 1.8E-17
CDD cd02863 Ubiquinol_oxidase_III IPR033946 Ubiquinol oxidase subunit III domain 25 206 2.85465E-94
PANTHER PTHR11403 CYTOCHROME C OXIDASE SUBUNIT III IPR024791 Cytochrome c oxidase subunit III 13 206 3.8E-40
NCBIfam TIGR02842 JCVI: cytochrome o ubiquinol oxidase subunit III IPR014206 Cytochrome o ubiquinol oxidase, subunit III 29 208 3.0E-85
Gene3D G3DSA:1.20.120.80 - IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle 23 208 3.5E-53

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.