Pseudomonas protegens CHA0, PFLCHA0_c55760 (trpG)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pprc02024	Quorum sensing	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pprc01130	Biosynthesis of antibiotics	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pprc01110	Biosynthesis of secondary metabolites	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pprc02025	Biofilm formation - Pseudomonas aeruginosa	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pprc01230	Biosynthesis of amino acids	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pprc01100	Metabolic pathways	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pprc00400	Phenylalanine, tyrosine and tryptophan biosynthesis	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
PRINTS	PR00097	Anthranilate synthase component II signature	-	-	99	107	6.1E-36
PRINTS	PR00097	Anthranilate synthase component II signature	-	-	74	85	6.1E-36
PRINTS	PR00099	Carbamoyl-phosphate synthase protein GATase domain signature	-	-	44	58	9.7E-6
PRINTS	PR00096	Glutamine amidotransferase superfamily signature	-	-	74	85	1.3E-13
FunFam	G3DSA:3.40.50.880:FF:000003	Anthranilate synthase component II	-	-	1	194	2.4E-89
PRINTS	PR00097	Anthranilate synthase component II signature	-	-	169	182	6.1E-36
PRINTS	PR00099	Carbamoyl-phosphate synthase protein GATase domain signature	-	-	74	90	9.7E-6
PRINTS	PR00097	Anthranilate synthase component II signature	-	-	119	131	6.1E-36
PRINTS	PR00097	Anthranilate synthase component II signature	-	-	47	56	6.1E-36
Pfam	PF00117	Glutamine amidotransferase class-I	IPR017926	Glutamine amidotransferase	4	191	4.9E-55
NCBIfam	TIGR00566	JCVI: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase	IPR006221	Anthranilate synthase/para-aminobenzoate synthase like domain	1	191	3.3E-86
PANTHER	PTHR43418	MULTIFUNCTIONAL TRYPTOPHAN BIOSYNTHESIS PROTEIN-RELATED	-	-	2	195	2.8E-86
Gene3D	G3DSA:3.40.50.880	-	IPR029062	Class I glutamine amidotransferase-like	1	194	7.9E-61
SUPERFAMILY	SSF52317	Class I glutamine amidotransferase-like	IPR029062	Class I glutamine amidotransferase-like	1	192	4.95E-55
PRINTS	PR00096	Glutamine amidotransferase superfamily signature	-	-	47	56	1.3E-13
PRINTS	PR00096	Glutamine amidotransferase superfamily signature	-	-	169	182	1.3E-13
PRINTS	PR00097	Anthranilate synthase component II signature	-	-	2	16	6.1E-36
CDD	cd01743	GATase1_Anthranilate_Synthase	IPR006221	Anthranilate synthase/para-aminobenzoate synthase like domain	2	190	5.57829E-111

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.