Pseudomonas protegens CHA0, PFLCHA0_c56410 (bioC)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009102 biotin biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00835
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0010340 carboxyl-O-methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:MF_00835
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008757 S-adenosylmethionine-dependent methyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.40.50.150
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pprc00780 Biotin metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pprc01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR13090 UNCHARACTERIZED - - 15 265 1.2E-25
NCBIfam TIGR02072 JCVI: malonyl-ACP O-methyltransferase BioC IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC 22 268 1.7E-73
SUPERFAMILY SSF53335 S-adenosyl-L-methionine-dependent methyltransferases IPR029063 S-adenosyl-L-methionine-dependent methyltransferase superfamily 20 269 1.52E-40
Gene3D G3DSA:3.40.50.150 Vaccinia Virus protein VP39 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase superfamily 12 216 1.1E-34
Pfam PF08241 Methyltransferase domain IPR013216 Methyltransferase type 11 58 151 1.2E-20
CDD cd02440 AdoMet_MTases - - 58 151 2.29399E-14
Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC 14 268 31.061831

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.