Pseudomonas poae RE_1-1-14, H045_12525

Gene Feature Overview

Strain	Pseudomonas poae RE*1-1-14 GCF_000336465.1|latest
Locus Tag	H045_12525
Name
Replicon	chromosome
Genomic location	2886610 - 2888427 (- strand)

Cross-References

RefSeq	YP_007398066.1
GI	447917498
Entrez	14504298
INSDC	AGE26570.1
NCBI Locus Tag	H045_12525
UniParc	UPI0002A7AE7B
UniProtKB Acc	M4K7C8
UniProtKB ID	M4K7C8_9PSED
UniRef100	UniRef100_M4K7C8
UniRef50	UniRef50_D7I2P8
UniRef90	UniRef90_I2BQD2

Product

Feature Type	CDS
Coding Frame	1
Product Name	ABC transporter permease
Synonyms
Evidence for Translation
Charge (pH 7)	7.81
Kyte-Doolittle Hydrophobicity Value	0.234
Molecular Weight (kDa)	66.3
Isoelectric Point (pI)	9.12

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000827 (524 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: H045_12525 Search term: ABC transporter permease

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000265724 ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40] E-value: 1.9e-50 Percent Identity: 31.5
Ensembl 110, assembly GRCh38.p14	ENSP00000478255 ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40] E-value: 1.9e-50 Percent Identity: 31.5

References