Pseudomonas poae RE_1-1-14, H045_12965

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50341
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50341
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppz02030 Bacterial chemotaxis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppz02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PIRSF PIRSF020479 UCP020479_CheW IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like 41 260 1.9E-93
SMART SM00260 chew_2 IPR002545 CheW-like domain 110 245 1.8E-17
SUPERFAMILY SSF50341 CheW-like IPR036061 CheW-like domain superfamily 112 246 3.4E-15
Pfam PF01584 CheW-like domain IPR002545 CheW-like domain 114 246 3.3E-12
CDD cd00588 CheW_like - - 116 244 8.78525E-17
PIRSF PIRSF020479 UCP020479_CheW IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like 2 68 0.061

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.