Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
---|---|---|---|---|---|---|
Molecular Function | GO:0003677 | DNA binding |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR04381
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0016887 | ATPase activity |
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0005524 | ATP binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF00158
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PF00158
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
||
Molecular Function | GO:0008134 | transcription factor binding |
Inferred from Sequence Model
Term mapped from: InterPro:PF00158
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
|
Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
---|---|---|---|---|---|---|---|
FunFam | G3DSA:3.30.450.20:FF:000052 | Sigma-54 dependent transcriptional regulator | - | - | 84 | 192 | 1.7E-64 |
PANTHER | PTHR32071 | TRANSCRIPTIONAL REGULATORY PROTEIN | - | - | 142 | 516 | 9.6E-103 |
CDD | cd00009 | AAA | - | - | 215 | 379 | 1.56674E-18 |
Gene3D | G3DSA:3.30.450.20 | PAS domain | - | - | 84 | 192 | 1.4E-19 |
Pfam | PF18024 | Helix-turn-helix domain | IPR030828 | TyrR family, helix-turn-helix domain | 468 | 515 | 1.7E-14 |
SMART | SM00091 | pas_2 | IPR000014 | PAS domain | 82 | 148 | 2.3E-4 |
SUPERFAMILY | SSF55021 | ACT-like | IPR045865 | ACT-like domain | 2 | 72 | 8.74E-9 |
SUPERFAMILY | SSF55785 | PYP-like sensor domain (PAS domain) | IPR035965 | PAS domain superfamily | 84 | 142 | 1.45E-7 |
Gene3D | G3DSA:3.40.50.300 | - | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | 194 | 380 | 1.9E-56 |
Gene3D | G3DSA:3.30.70.260 | - | - | - | 1 | 83 | 3.8E-23 |
SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | IPR027417 | P-loop containing nucleoside triphosphate hydrolase | 208 | 450 | 9.24E-61 |
SMART | SM00382 | AAA_5 | IPR003593 | AAA+ ATPase domain | 228 | 373 | 1.8E-6 |
Gene3D | G3DSA:1.10.8.60 | - | - | - | 381 | 454 | 1.6E-20 |
CDD | cd00130 | PAS | IPR000014 | PAS domain | 94 | 142 | 6.2132E-4 |
Pfam | PF00158 | Sigma-54 interaction domain | IPR002078 | RNA polymerase sigma factor 54 interaction domain | 209 | 375 | 1.3E-57 |
SUPERFAMILY | SSF46689 | Homeodomain-like | IPR009057 | Homeobox-like domain superfamily | 461 | 515 | 2.39E-7 |
Gene3D | G3DSA:1.10.10.60 | - | - | - | 463 | 517 | 5.2E-18 |
FunFam | G3DSA:3.40.50.300:FF:000006 | DNA-binding transcriptional regulator NtrC | - | - | 199 | 379 | 7.6E-69 |
NCBIfam | TIGR04381 | JCVI: TyrR family helix-turn-helix domain | IPR030828 | TyrR family, helix-turn-helix domain | 470 | 517 | 1.0E-21 |