Pseudomonas poae RE_1-1-14, H045_13450 (cysM)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Biological Process	GO:0006535	cysteine biosynthetic process from serine	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR01138	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Molecular Function	GO:0004124	cysteine synthase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR01138	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	ppz01110	Biosynthesis of secondary metabolites	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	ppz01230	Biosynthesis of amino acids	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	ppz01200	Carbon metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	ppz01100	Metabolic pathways	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	ppz01130	Biosynthesis of antibiotics	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	ppz00920	Sulfur metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	ppz00270	Cysteine and methionine metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	ppz01120	Microbial metabolism in diverse environments	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
NCBIfam	TIGR01136	JCVI: cysteine synthase	IPR005856	Cysteine synthase	7	294	9.2E-123
Gene3D	G3DSA:3.40.50.1100	-	IPR036052	Tryptophan synthase beta chain-like, PALP domain superfamily	6	291	6.4E-111
Gene3D	G3DSA:3.40.50.1100	-	IPR036052	Tryptophan synthase beta chain-like, PALP domain superfamily	37	155	6.4E-111
PANTHER	PTHR10314	CYSTATHIONINE BETA-SYNTHASE	-	-	7	296	4.3E-94
Pfam	PF00291	Pyridoxal-phosphate dependent enzyme	IPR001926	Tryptophan synthase beta chain-like, PALP domain	7	283	1.5E-66
Coils	Coil	Coil	-	-	232	252	-
NCBIfam	TIGR01138	JCVI: cysteine synthase B	IPR005858	Cysteine synthase CysM	5	294	0.0
SUPERFAMILY	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes	IPR036052	Tryptophan synthase beta chain-like, PALP domain superfamily	2	295	2.23E-90
FunFam	G3DSA:3.40.50.1100:FF:000003	Cystathionine beta-synthase	-	-	40	149	5.3E-44
CDD	cd01561	CBS_like	-	-	11	290	0.0
FunFam	G3DSA:3.40.50.1100:FF:000029	Cysteine synthase	-	-	150	291	2.2E-71

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.