Pseudomonas poae RE_1-1-14, H045_20440

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016887 ATPase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM00382
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005524 ATP binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00300
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG ppz03070 Bacterial secretion system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG ppz02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF00004 ATPase family associated with various cellular activities (AAA) IPR003959 ATPase, AAA-type, core 233 366 5.0E-9
Gene3D G3DSA:1.10.1780.10 - IPR036628 Clp, N-terminal domain superfamily 1 161 9.8E-41
Coils Coil Coil - - 442 462 -
SMART SM01086 ClpB_D2_small_2 IPR019489 Clp ATPase, C-terminal 788 880 6.0E-11
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 565 861 5.51E-62
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 620 638 4.3E-30
FunFam G3DSA:3.40.50.300:FF:000025 ATP-dependent Clp protease subunit - - 569 786 1.0E-78
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 569 786 1.5E-66
SUPERFAMILY SSF81923 Double Clp-N motif IPR036628 Clp, N-terminal domain superfamily 12 131 2.16E-18
Pfam PF17871 AAA lid domain IPR041546 ClpA/ClpB, AAA lid domain 372 464 7.1E-28
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 694 712 4.3E-30
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 228 373 2.4E-10
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 374 563 3.6E-49
FunFam G3DSA:3.40.50.300:FF:000010 Chaperone clpB 1, putative - - 180 372 8.8E-83
Pfam PF10431 C-terminal, D2-small domain, of ClpB protein IPR019489 Clp ATPase, C-terminal 788 862 3.7E-13
Pfam PF07724 AAA domain (Cdc48 subfamily) IPR003959 ATPase, AAA-type, core 615 781 9.0E-39
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 189 513 1.46E-70
CDD cd19499 RecA-like_ClpB_Hsp104-like - - 578 786 4.23926E-91
NCBIfam TIGR03345 JCVI: type VI secretion system ATPase TssH IPR017729 AAA+ ATPase ClpV1 13 872 0.0
CDD cd00009 AAA - - 211 366 4.5757E-15
Gene3D G3DSA:1.10.8.60 - - - 788 883 2.5E-8
Coils Coil Coil - - 522 542 -
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 665 683 4.3E-30
SMART SM00382 AAA_5 IPR003593 AAA+ ATPase domain 616 775 3.1E-8
PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature IPR001270 ClpA/B family 727 741 4.3E-30
PANTHER PTHR11638 ATP-DEPENDENT CLP PROTEASE - - 18 862 0.0
Gene3D G3DSA:3.40.50.300 - IPR027417 P-loop containing nucleoside triphosphate hydrolase 181 372 1.7E-71

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.