Pseudomonas denitrificans ATCC 13867, H681_00300 (fmt)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009058 biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02911
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0071951 conversion of methionyl-tRNA to N-formyl-methionyl-tRNA
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00460
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003824 catalytic activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50486
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004479 methionyl-tRNA formyltransferase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00460
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pdr00970 Aminoacyl-tRNA biosynthesis 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pdr00670 One carbon pool by folate 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:3.40.50.170:FF:000003 Methionyl-tRNA formyltransferase - - 1 209 4.3E-106
NCBIfam TIGR00460 JCVI: methionyl-tRNA formyltransferase IPR005794 Methionyl-tRNA formyltransferase 5 306 7.8E-94
Gene3D G3DSA:3.10.25.10 - IPR037022 Formyl transferase, C-terminal domain superfamily 210 312 4.4E-32
CDD cd08704 Met_tRNA_FMT_C IPR044135 Methionyl-tRNA formyltransferase, C-terminal domain 211 294 1.32279E-33
CDD cd08646 FMT_core_Met-tRNA-FMT_N IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain 5 208 3.04509E-117
SUPERFAMILY SSF50486 FMT C-terminal domain-like IPR011034 Formyl transferase-like, C-terminal domain superfamily 208 307 5.23E-31
Gene3D G3DSA:3.40.50.170 - - - 1 209 3.9E-77
Pfam PF02911 Formyl transferase, C-terminal domain IPR005793 Formyl transferase, C-terminal 207 302 4.2E-27
SUPERFAMILY SSF53328 Formyltransferase IPR036477 Formyl transferase, N-terminal domain superfamily 5 210 1.09E-68
Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. IPR005794 Methionyl-tRNA formyltransferase 5 305 37.734627
PANTHER PTHR11138 METHIONYL-TRNA FORMYLTRANSFERASE - - 2 313 3.9E-82
Pfam PF00551 Formyl transferase IPR002376 Formyl transferase, N-terminal 6 184 2.4E-48

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.