Pseudomonas denitrificans ATCC 13867, H681_01885

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0004673 protein histidine kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.20.120.160
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50341
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SM01231
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50341
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pdr02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pdr02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1145 1241 0.15
CDD cd16916 HATPase_CheA-like - - 2164 2339 2.01092E-78
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1703 1801 9.68429E-15
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 985 1114 1.6E-28
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 2326 2339 1.8E-8
SMART SM01231 H_kinase_dim_2 IPR004105 Histidine kinase CheA-like, homodimeric domain 2017 2156 1.9E-10
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 985 1083 2.5E-5
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1854 1953 1.8E-16
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1145 1236 3.73105E-6
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 2246 2260 1.8E-8
Gene3D G3DSA:3.40.50.2300 - - - 2516 2635 4.9E-39
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1492 1614 6.28E-28
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 433 554 1.0E-12
CDD cd17546 REC_hyHK_CKI1_RcsC-like - - 2516 2627 2.12122E-30
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 986 1061 7.46104E-8
FunFam G3DSA:3.30.565.10:FF:000016 Chemotaxis protein CheA, putative - - 2157 2341 1.2E-58
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1145 1268 9.03E-19
SMART SM00260 chew_2 IPR002545 CheW-like domain 2334 2484 3.6E-33
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 2155 2341 9.7E-52
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1851 1968 2.6E-24
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1287 1408 1.18E-13
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1703 1800 1.7E-4
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1139 1276 1.0E-17
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1494 1592 3.6E-14
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 2514 2632 2.56E-35
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1853 1955 1.13429E-12
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 14 136 2.6E-10
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 2302 2320 1.8E-8
SUPERFAMILY SSF50341 CheW-like IPR036061 CheW-like domain superfamily 2341 2480 1.44E-20
MobiDBLite mobidb-lite consensus disorder prediction - - 687 730 -
PANTHER PTHR43395 SENSOR HISTIDINE KINASE CHEA - - 1737 2631 0.0
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 986 1111 8.41E-28
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 2201 2342 2.4E-18
Gene3D G3DSA:2.30.30.40 SH3 Domains - - 2422 2482 3.6E-19
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1147 1231 1.0E-11
Pfam PF01584 CheW-like domain IPR002545 CheW-like domain 2347 2485 1.7E-20
MobiDBLite mobidb-lite consensus disorder prediction - - 1441 1466 -
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 2514 2627 5.8E-36
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1492 1620 1.5E-28
MobiDBLite mobidb-lite consensus disorder prediction - - 622 643 -
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1492 1589 2.5E-8
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 988 1076 5.0E-14
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 2205 2341 3.8E-12
Coils Coil Coil - - 1860 1880 -
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 10 99 1.6E-6
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1852 1948 4.1E-6
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1705 1804 5.3E-14
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1703 1824 6.8E-26
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1492 1590 6.06821E-15
MobiDBLite mobidb-lite consensus disorder prediction - - 1106 1137 -
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 2516 2627 6.3E-27
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 7 130 4.06E-21
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1288 1418 6.8E-14
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1701 1832 4.0E-27
Coils Coil Coil - - 2055 2075 -
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1854 1961 3.53E-21
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 2158 2339 6.16E-35

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.