Pseudomonas denitrificans ATCC 13867, H681_07900 (cysM)

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments
Molecular Function	GO:0004124	cysteine synthase activity	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR01136	ECO:0000259 match to InterPro signature evidence used in automatic assertion
Biological Process	GO:0006535	cysteine biosynthetic process from serine	ISM Inferred from Sequence Model Term mapped from: InterPro:TIGR01136	ECO:0000259 match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database	Xref	Pathway	Version	Evidence	PMID
KEGG	pdr01120	Microbial metabolism in diverse environments	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pdr01130	Biosynthesis of antibiotics	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pdr01110	Biosynthesis of secondary metabolites	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pdr00270	Cysteine and methionine metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pdr01230	Biosynthesis of amino acids	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pdr00920	Sulfur metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pdr01100	Metabolic pathways	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion
KEGG	pdr01200	Carbon metabolism	81.0+/01-23, Jan 17	ECO:0000249 sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
NCBIfam	TIGR01136	JCVI: cysteine synthase	IPR005856	Cysteine synthase	9	296	4.2E-123
Gene3D	G3DSA:3.40.50.1100	-	IPR036052	Tryptophan synthase beta chain-like, PALP domain superfamily	39	157	1.1E-111
PANTHER	PTHR10314	CYSTATHIONINE BETA-SYNTHASE	-	-	10	297	1.4E-93
FunFam	G3DSA:3.40.50.1100:FF:000003	Cystathionine beta-synthase	-	-	42	149	3.1E-43
NCBIfam	TIGR01138	JCVI: cysteine synthase B	IPR005858	Cysteine synthase CysM	7	296	0.0
Gene3D	G3DSA:3.40.50.1100	-	IPR036052	Tryptophan synthase beta chain-like, PALP domain superfamily	8	292	1.1E-111
FunFam	G3DSA:3.40.50.1100:FF:000029	Cysteine synthase	-	-	150	293	1.6E-73
CDD	cd01561	CBS_like	-	-	13	292	0.0
SUPERFAMILY	SSF53686	Tryptophan synthase beta subunit-like PLP-dependent enzymes	IPR036052	Tryptophan synthase beta chain-like, PALP domain superfamily	6	292	7.86E-90
Pfam	PF00291	Pyridoxal-phosphate dependent enzyme	IPR001926	Tryptophan synthase beta chain-like, PALP domain	9	285	2.2E-66

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.