Pseudomonas denitrificans ATCC 13867, H681_24590

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0016491 oxidoreductase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02819
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pdr01100 Metabolic pathways 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pdr01200 Carbon metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pdr01120 Microbial metabolism in diverse environments 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pdr00680 Methane metabolism 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pdr00625 Chloroalkane and chloroalkene degradation 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF08240 Alcohol dehydrogenase GroES-like domain IPR013154 Alcohol dehydrogenase-like, N-terminal 35 144 4.0E-26
FunFam G3DSA:3.40.50.720:FF:000166 Glutathione-independent formaldehyde dehydrogenase - - 172 338 2.2E-107
Gene3D G3DSA:3.40.50.720 - - - 177 343 0.0
SUPERFAMILY SSF51735 NAD(P)-binding Rossmann-fold domains IPR036291 NAD(P)-binding domain superfamily 162 356 5.98E-67
Gene3D G3DSA:3.90.180.10 - - - 7 381 0.0
CDD cd08282 PFDH_like - - 4 392 0.0
Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain 183 233 1.6E-5
PANTHER PTHR42813 ZINC-TYPE ALCOHOL DEHYDROGENASE-LIKE - - 4 393 7.0E-114
SUPERFAMILY SSF50129 GroES-like IPR011032 GroES-like superfamily 4 187 3.09E-64
NCBIfam TIGR02819 JCVI: formaldehyde dehydrogenase, glutathione-independent IPR014184 Formaldehyde dehydrogenase, glutathione-independent 2 395 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.