Pseudomonas aeruginosa LESB58, PALES_00781

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Protein secretion/export apparatus Other LESB58 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF06761 Intracellular multiplication and human macrophage-killing IPR009612 IcmF-related 429 722 4.5E-86
CDD cd00882 Ras_like_GTPase - - 55 198 0.0074833
Pfam PF06744 Type VI secretion protein IcmF C2-like domain IPR010623 Type VI secretion system IcmF, C-terminal 976 1082 2.3E-28
NCBIfam TIGR03348 JCVI: type VI secretion system membrane subunit TssM IPR017731 Type VI secretion system protein TssM1-like 8 1099 0.0
Coils Coil Coil - - 21 41 -
Pfam PF14331 IcmF-related N-terminal domain IPR025743 IcmF-related, N-terminal domain 120 377 4.1E-99
PANTHER PTHR36153 INNER MEMBRANE PROTEIN-RELATED - - 3 1101 0.0
SUPERFAMILY SSF52540 P-loop containing nucleoside triphosphate hydrolases IPR027417 P-loop containing nucleoside triphosphate hydrolase 50 219 1.34E-11
MobiDBLite mobidb-lite consensus disorder prediction - - 751 770 -

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.