Pseudomonas aeruginosa LESB58, PALES_00921

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other LESB58 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Gene3D G3DSA:2.40.50.230 - IPR037026 Vgr protein, OB-fold domain superfamily 352 454 5.0E-46
SUPERFAMILY SSF69279 Phage tail proteins - - 8 181 1.28E-62
Pfam PF04717 Type VI secretion system/phage-baseplate injector OB domain IPR006531 Gp5/Type VI secretion system Vgr protein, OB-fold domain 383 450 5.4E-15
Pfam PF05954 Phage tail baseplate hub (GPD) - - 26 326 1.3E-104
PANTHER PTHR32305 - - - 23 624 2.4E-96
Gene3D G3DSA:2.30.110.50 - - - 12 330 0.0
SUPERFAMILY SSF69349 Phage fibre proteins - - 439 623 7.69E-42
FunFam G3DSA:4.10.220.110:FF:000001 VgrG1 - - 221 283 1.1E-33
SUPERFAMILY SSF69255 gp5 N-terminal domain-like - - 362 449 1.15E-35
NCBIfam TIGR01646 JCVI: type VI secretion system tip protein VgrG IPR006533 Type VI secretion system, RhsGE-associated Vgr protein 20 503 0.0
SUPERFAMILY SSF69279 Phage tail proteins - - 187 360 4.42E-36
Gene3D G3DSA:4.10.220.110 - - - 221 283 0.0
FunFam G3DSA:2.40.50.230:FF:000001 Type VI secretion protein VgrG - - 352 454 7.5E-62
Gene3D G3DSA:3.55.50.10 - - - 95 186 0.0
FunFam G3DSA:3.55.50.10:FF:000001 Actin cross-linking toxin VgrG1 - - 95 186 2.1E-44
NCBIfam TIGR03361 JCVI: type VI secretion system tip protein TssI/VgrG N-terminal domain IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset 8 520 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.