Pseudomonas aeruginosa LESB58, PALES_02581

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments

Functional Classifications Manually Assigned by PseudoCAP

Hypothetical, unclassified, unknown Other LESB58 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
MobiDBLite mobidb-lite consensus disorder prediction - - 268 291 -
Pfam PF13296 Putative type VI secretion system Rhs element Vgr IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain 475 581 2.8E-34
Pfam PF05954 Phage tail baseplate hub (GPD) - - 27 327 1.5E-74
NCBIfam TIGR03361 JCVI: type VI secretion system tip protein TssI/VgrG N-terminal domain IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset 9 493 0.0
Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) IPR018769 Type VI secretion system spike protein VgrG2, domain of unknown function DUF2345 615 758 6.6E-48
Gene3D G3DSA:2.40.50.230 - IPR037026 Vgr protein, OB-fold domain superfamily 358 456 1.0E-39
Gene3D G3DSA:2.30.110.50 - - - 21 328 3.9E-78
SUPERFAMILY SSF69349 Phage fibre proteins - - 442 493 1.8E-9
SUPERFAMILY SSF69279 Phage tail proteins - - 197 365 2.72E-31
Pfam PF04717 Type VI secretion system/phage-baseplate injector OB domain IPR006531 Gp5/Type VI secretion system Vgr protein, OB-fold domain 386 453 8.5E-14
SUPERFAMILY SSF69255 gp5 N-terminal domain-like - - 364 451 1.31E-33
MobiDBLite mobidb-lite consensus disorder prediction - - 268 289 -
NCBIfam TIGR01646 JCVI: type VI secretion system tip protein VgrG IPR006533 Type VI secretion system, RhsGE-associated Vgr protein 19 502 8.2E-120
SUPERFAMILY SSF69279 Phage tail proteins - - 9 182 5.36E-47
Gene3D G3DSA:4.10.220.110 - - - 221 284 3.9E-78
Gene3D G3DSA:3.55.50.10 - - - 96 187 3.9E-78
PANTHER PTHR32305 - - - 3 724 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.