Pseudomonas aeruginosa LESB58, PALES_17071 (dsdA)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0030170 pyridoxal phosphate binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02035
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0046416 D-amino acid metabolic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02035
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008721 D-serine ammonia-lyase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02035
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Amino acid biosynthesis and metabolism Other LESB58 genes in this class

Pathways

Database Xref Pathway Version Evidence PMID
PseudoCAP Glycine, serine and threonine metabolism ECO:0000037
not_recorded

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Hamap MF_01030 D-serine dehydratase [dsdA]. IPR011780 D-serine ammonia-lyase 1 448 258.795685
Pfam PF00291 Pyridoxal-phosphate dependent enzyme IPR001926 Tryptophan synthase beta chain-like, PALP domain 97 398 3.4E-57
Gene3D G3DSA:3.40.50.1100 - IPR036052 Tryptophan synthase beta chain-like, PALP domain superfamily 14 441 0.0
Gene3D G3DSA:3.40.50.1100 - IPR036052 Tryptophan synthase beta chain-like, PALP domain superfamily 117 239 0.0
SUPERFAMILY SSF53686 Tryptophan synthase beta subunit-like PLP-dependent enzymes IPR036052 Tryptophan synthase beta chain-like, PALP domain superfamily 98 440 1.22E-54
PANTHER PTHR48078 THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED - - 80 444 1.4E-38
NCBIfam TIGR02035 JCVI: D-serine ammonia-lyase IPR011780 D-serine ammonia-lyase 10 440 0.0

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.