Pseudomonas aeruginosa LESB58, PALES_40641 (aprF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0046903 secretion
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA1248
 ECO:0000249
sequence similarity evidence used in automatic assertion		 1427098
Cellular Component GO:0019867 outer membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01844
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02321
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0015562 efflux transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02321
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Protein secretion/export apparatus Other LESB58 genes in this class
Secreted Factors (toxins, enzymes, alginate) Other LESB58 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR30026 OUTER MEMBRANE PROTEIN TOLC - - 1 442 2.2E-93
SUPERFAMILY SSF56954 Outer membrane efflux proteins (OEP) - - 26 440 1.96E-86
Pfam PF02321 Outer membrane efflux protein IPR003423 Outer membrane efflux protein 31 219 6.3E-25
Gene3D G3DSA:1.20.1600.10 Outer membrane efflux proteins (OEP) - - 27 447 1.5E-81
MobiDBLite mobidb-lite consensus disorder prediction - - 462 481 -
NCBIfam TIGR01844 JCVI: TolC family outer membrane protein IPR010130 Type I secretion outer membrane protein, TolC 24 444 0.0
Coils Coil Coil - - 148 168 -
FunFam G3DSA:1.20.1600.10:FF:000014 Alkaline protease secretion protein AprF - - 27 447 0.0
Pfam PF02321 Outer membrane efflux protein IPR003423 Outer membrane efflux protein 247 430 2.7E-32

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.