Pseudomonas aeruginosa 2192, PA2G_06136

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003676 nucleic acid binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00313
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other 2192 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam NF041604 NCBIFAM: cold shock protein N-terminal extension domain IPR048090 Cold shock protein-like, N-terminal extension domain 1 108 2.0E-25
PRINTS PR00050 Cold shock protein signature IPR002059 Cold-shock protein, DNA-binding 159 168 1.9E-15
Pfam PF00313 'Cold-shock' DNA-binding domain IPR002059 Cold-shock protein, DNA-binding 138 199 1.7E-25
SMART SM00357 csp_8 IPR011129 Cold shock domain 138 201 6.5E-25
MobiDBLite mobidb-lite consensus disorder prediction - - 111 138 -
MobiDBLite mobidb-lite consensus disorder prediction - - 124 138 -
Gene3D G3DSA:2.40.50.140 - IPR012340 Nucleic acid-binding, OB-fold 129 203 5.7E-26
CDD cd04458 CSP_CDS IPR002059 Cold-shock protein, DNA-binding 138 198 3.06251E-31
SUPERFAMILY SSF50249 Nucleic acid-binding proteins IPR012340 Nucleic acid-binding, OB-fold 136 199 3.67E-22
PRINTS PR00050 Cold shock protein signature IPR002059 Cold-shock protein, DNA-binding 139 154 1.9E-15
PRINTS PR00050 Cold shock protein signature IPR002059 Cold-shock protein, DNA-binding 174 192 1.9E-15
PANTHER PTHR11544 COLD SHOCK DOMAIN CONTAINING PROTEINS - - 137 200 1.8E-19

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.