Pseudomonas aeruginosa PACS2, A0K_RS02310

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Molecular Function GO:0003676 nucleic acid binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF002599
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Adaptation, Protection Other PACS2 genes in this class
Transcriptional regulators Other PACS2 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PRINTS PR00050 Cold shock protein signature IPR002059 Cold-shock protein, DNA-binding 26 35 1.7E-18
PRINTS PR00050 Cold shock protein signature IPR002059 Cold-shock protein, DNA-binding 6 21 1.7E-18
SUPERFAMILY SSF50249 Nucleic acid-binding proteins IPR012340 Nucleic acid-binding, OB-fold 3 68 4.41E-25
FunFam G3DSA:2.40.50.140:FF:000006 Cold shock protein CspC - - 3 68 2.2E-31
PRINTS PR00050 Cold shock protein signature IPR002059 Cold-shock protein, DNA-binding 41 59 1.7E-18
Gene3D G3DSA:6.20.370.130 - - - 46 66 1.6E-5
Pfam PF00313 'Cold-shock' DNA-binding domain IPR002059 Cold-shock protein, DNA-binding 5 67 4.9E-29
PANTHER PTHR11544 COLD SHOCK DOMAIN CONTAINING PROTEINS - - 4 65 8.5E-23
PIRSF PIRSF002599 Cold_shock_A IPR012156 Cold shock, CspA 1 69 1.3E-23
CDD cd04458 CSP_CDS IPR002059 Cold-shock protein, DNA-binding 4 67 1.15053E-29
Gene3D G3DSA:2.40.50.140 - IPR012340 Nucleic acid-binding, OB-fold 4 45 3.1E-22
SMART SM00357 csp_8 IPR011129 Cold shock domain 5 68 3.6E-29

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.