Pseudomonas aeruginosa PACS2, A0K_RS07325

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0015822 ornithine transport
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA0888
 ECO:0000249
sequence similarity evidence used in automatic assertion		 9791103
Biological Process GO:1902023 L-arginine transport
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA0888
 ECO:0000249
sequence similarity evidence used in automatic assertion		 9791103
Cellular Component GO:0030288 outer membrane-bounded periplasmic space
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01096
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0071705 nitrogen compound transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR01096
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transport of small molecules Other PACS2 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
NCBIfam TIGR01096 JCVI: lysine/arginine/ornithine ABC transporter substrate-binding protein IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter 4 251 4.5E-94
Gene3D G3DSA:3.40.190.10 - - - 27 250 9.7E-81
Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF 26 252 1.3E-65
CDD cd13703 PBP2_HisJ_LAO - - 24 251 0.0
FunFam G3DSA:3.40.190.10:FF:000245 ABC transporter substrate-binding protein - - 111 211 2.1E-66
Gene3D G3DSA:3.40.190.10 - - - 111 211 9.7E-81
SMART SM00062 AABind_6 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF 25 254 2.1E-81
PANTHER PTHR35936 MEMBRANE-BOUND LYTIC MUREIN TRANSGLYCOSYLASE F - - 5 251 1.8E-50
SUPERFAMILY SSF53850 Periplasmic binding protein-like II - - 1 255 3.03E-70

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.