Pseudomonas aeruginosa UCBPP-PA14, PA14_63100

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14 (Lee et al., 2006)
GCF_000014625.1|latest
Locus Tag
PA14_63100
Name
Replicon chromosome
Genomic location 5630365 - 5633181 (+ strand)
Transposon Mutants 1 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 2 transposon mutants in orthologs

Cross-References

RefSeq YP_793236.1
GI 116052919
Entrez 4383221
INSDC ABJ14155.1
NCBI Locus Tag PA14_63100
UniParc UPI0000396E84
UniProtKB Acc Q02FQ0
UniProtKB ID Q02FQ0_PSEAB
UniRef100 UniRef100_S0HSI5
UniRef50 UniRef50_A6VRD5
UniRef90 UniRef90_A6VCM9

Product

Feature Type CDS
Coding Frame 1
Product Name
ferredoxin
Synonyms
Evidence for Translation
Charge (pH 7) -5.62
Kyte-Doolittle Hydrophobicity Value -0.138
Molecular Weight (kDa) 102.6
Isoelectric Point (pI) 6.55

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 537 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG004415 (500 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_63100
Search term: ferredoxin

Human Homologs

Ensembl 110, assembly GRCh38.p14
lactate dehydrogenase D [Source:HGNC Symbol;Acc:HGNC:19708]
E-value: 2.2e-24
Percent Identity: 26.0

References

No references are associated with this feature.