Pseudomonas aeruginosa PAO1, PA1480 (ccmF)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse PseudoCyc / Metabolic Pathways

Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA1480
Name
ccmF
Synonym: ccl1
Synonym: cycK
Replicon chromosome
Genomic location 1605088 - 1607061 (+ strand)
Transposon Mutants 1 transposon mutants in PAO1
Transposon Mutants in orthologs 1 transposon mutants in orthologs

Cross-References

RefSeq NP_250171.1
GI 15596677
Affymetrix PA1480_ccmF_at
Entrez 881004
GenBank AAG04869.1
INSDC AAG04869.1
NCBI Locus Tag PA1480
protein_id(GenBank) gb|AAG04869.1|AE004577_4|gnl|PseudoCAP|PA1480
TIGR NTL03PA01481
UniParc UPI00000C539B
UniProtKB Acc Q9I3N2
UniProtKB ID CCMF_PSEAE
UniRef100 UniRef100_Q9I3N2
UniRef50 UniRef50_Q9I3N2
UniRef90 UniRef90_Q9I3N2

Product

Feature Type CDS
Coding Frame 1
Product Name
cytochrome C-type biogenesis protein CcmF
Product Name Confidence: Class 2
Synonyms
Evidence for Translation
Identified using nanoflow high-pressure liquid chromatography (HPLC) in conjunction with microelectrospray ionization on LTQ XL mass spectrometer (PMID:24291602).
Charge (pH 7) 13.03
Kyte-Doolittle Hydrophobicity Value 0.609
Molecular Weight (kDa) 71.7
Isoelectric Point (pI) 9.72

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 302 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001395 (552 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA1480
Search term: ccmF

References

No references are associated with this feature.