Pseudomonas fluorescens Pf0-1, Pfl01_0020
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Feature Overview
| Strain |
Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest |
| Locus Tag |
Pfl01_0020
|
| Name |
|
| Replicon | chromosome |
| Genomic location | 22437 - 22994 (+ strand) |
Cross-References
| RefSeq | YP_345753.1 |
| GI | 77456248 |
| Entrez | 3717639 |
| NCBI Locus Tag | Pfl01_0020 |
Product
| Feature Type | CDS |
| Coding Frame | 1 |
| Product Name |
SUA5/yciO/yrdC-like
|
| Synonyms | |
| Evidence for Translation | |
| Charge (pH 7) | 0.65 |
| Kyte-Doolittle Hydrophobicity Value | -0.197 |
| Molecular Weight (kDa) | 20611.3 |
| Isoelectric Point (pI) | 7.52 |
Subcellular localization
| Individual Mappings | |
| Additional evidence for subcellular localization |
AlphaFold 2 Protein Structure Predictions
Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.
Pathogen Association Analysis
| Results | Analysis not done |
Orthologs/Comparative Genomics
| Pseudomonas Ortholog Database | View orthologs at Pseudomonas Ortholog Database |
| Pseudomonas Ortholog Group |
POG000022 (537 members) |
| Putative Inparalogs | None Found |
Interactions
| STRING database | Search for predicted protein-protein interactions using:
Search term: Pfl01_0020
Search term: SUA5/yciO/yrdC-like
|
Human Homologs
|
Ensembl
110, assembly
GRCh38.p14
|
yrdC N6-threonylcarbamoyltransferase domain containing [Source:HGNC Symbol;Acc:HGNC:28905]
E-value:
7.9e-11
Percent Identity:
28.3
|
References
No references are associated with this feature.