Pseudomonas fluorescens Pf0-1, Pfl01_2952

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest
Locus Tag
Pfl01_2952
Name
Replicon chromosome
Genomic location 3391795 - 3392994 (+ strand)

Cross-References

RefSeq YP_348683.1
GI 77459177
Entrez 3712362
INSDC ABA74693.1
NCBI Locus Tag Pfl01_2952
UniParc UPI00005C7B40
UniProtKB Acc Q3KC12
UniProtKB ID Q3KC12_PSEPF
UniRef100 UniRef100_Q3KC12
UniRef50 UniRef50_Q3KC12
UniRef90 UniRef90_Q3KC12

Product

Feature Type CDS
Coding Frame 1
Product Name
TonB-dependent receptor
Synonyms
Evidence for Translation
Charge (pH 7) -3.35
Kyte-Doolittle Hydrophobicity Value -0.443
Molecular Weight (kDa) 44100.5
Isoelectric Point (pI) 6.18

Subcellular localization

Individual Mappings
Localization Confidence PMID
Outer Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG027483 (1 members)
Putative Inparalogs 1 predicted inparalogs
TonB-dependent siderophore receptor (Pfl01_3318) 49.6% identity

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pfl01_2952

Human Homologs

References

No references are associated with this feature.