Pseudomonas fluorescens Pf0-1, Pfl01_3884

Gene Feature Overview

Strain	Pseudomonas fluorescens Pf0-1 GCF_000012445.1|latest
Locus Tag	Pfl01_3884
Name
Replicon	chromosome
Genomic location	4392893 - 4394686 (- strand)

Cross-References

RefSeq	YP_349612.1
GI	77460105
Entrez	3712530
INSDC	ABA75621.1
NCBI Locus Tag	Pfl01_3884
UniParc	UPI00003884A0
UniProtKB Acc	Q3K9D3
UniProtKB ID	Q3K9D3_PSEPF
UniRef100	UniRef100_Q3K9D3
UniRef50	UniRef50_Q48A62
UniRef90	UniRef90_W6VIT2

Product

Feature Type	CDS
Coding Frame	1
Product Name	ABC transporter, ATP-binding/permease
Synonyms
Evidence for Translation
Charge (pH 7)	1.60
Kyte-Doolittle Hydrophobicity Value	0.302
Molecular Weight (kDa)	65160.9
Isoelectric Point (pI)	7.41

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Membrane Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG001073 (497 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: Pfl01_3884 Search term: ABC transporter, ATP-binding/permease

Human Homologs

Ensembl 110, assembly GRCh38.p14

ENSP00000355637 ATP binding cassette subfamily B member 10 [Source:HGNC Symbol;Acc:HGNC:41] E-value: 1.1e-93 Percent Identity: 37.5

References