Pseudomonas fluorescens Pf0-1, Pfl01_4088

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest
Locus Tag
Pfl01_4088
Name
Replicon chromosome
Genomic location 4624579 - 4626396 (- strand)

Cross-References

RefSeq YP_349816.1
GI 77460309
Entrez 3712333
INSDC ABA75825.1
NCBI Locus Tag Pfl01_4088
UniParc UPI00003C773F
UniProtKB Acc Q3K8S9
UniProtKB ID Q3K8S9_PSEPF
UniRef100 UniRef100_Q3K8S9
UniRef50 UniRef50_D7I2P8
UniRef90 UniRef90_W6VLI5

Product

Feature Type CDS
Coding Frame 1
Product Name
ABC transporter-like protein
Synonyms
Evidence for Translation
Charge (pH 7) 7.02
Kyte-Doolittle Hydrophobicity Value 0.211
Molecular Weight (kDa) 66279.4
Isoelectric Point (pI) 8.77

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000827 (524 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pfl01_4088

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 10 [Source:HGNC Symbol;Acc:HGNC:41]
E-value: 1.0e-51
Percent Identity: 27.9

References

No references are associated with this feature.