Pseudomonas fluorescens Pf0-1, Pfl01_4275 (alaS)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas fluorescens Pf0-1
GCF_000012445.1|latest
Locus Tag
Pfl01_4275
Name
alaS
Replicon chromosome
Genomic location 4822883 - 4825507 (- strand)

Cross-References

RefSeq YP_350003.1
GI 77460496
EC Number 6.1.1.7
Entrez 3712887
INSDC ABA76012.1
NCBI Locus Tag Pfl01_4275
UniParc UPI00003C77A2
UniProtKB Acc Q3K892
UniProtKB ID SYA_PSEPF
UniRef100 UniRef100_Q3K892
UniRef50 UniRef50_Q6D1T0
UniRef90 UniRef90_A5W0D9

Product

Feature Type CDS
Coding Frame 1
Product Name
alanyl-tRNA synthetase
Synonyms
Evidence for Translation
Charge (pH 7) -20.68
Kyte-Doolittle Hydrophobicity Value -0.188
Molecular Weight (kDa) 94384.8
Isoelectric Point (pI) 5.40

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000870 (535 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Pfl01_4275
Search term: alaS

Human Homologs

Ensembl 110, assembly GRCh38.p14
alanyl-tRNA synthetase 1 [Source:HGNC Symbol;Acc:HGNC:20]
E-value: 1.1e-134
Percent Identity: 36.9

References

No references are associated with this feature.