Pseudomonas fluorescens Pf0-1, Pfl01_5130

Gene Feature Overview

Strain	Pseudomonas fluorescens Pf0-1 GCF_000012445.1|latest
Locus Tag	Pfl01_5130
Name
Replicon	chromosome
Genomic location	5764273 - 5764944 (- strand)

Cross-References

RefSeq	YP_350858.1
GI	77461351
Entrez	3717048
INSDC	ABA76867.1
NCBI Locus Tag	Pfl01_5130
UniParc	UPI0000387958
UniProtKB Acc	Q3K5T7
UniProtKB ID	Q3K5T7_PSEPF
UniRef100	UniRef100_Q3K5T7
UniRef50	UniRef50_Q5RLL2
UniRef90	UniRef90_A0A0B7DFU9

Product

Feature Type	CDS
Coding Frame	1
Product Name	nucleotidyl transferase
Synonyms
Evidence for Translation
Charge (pH 7)	-8.63
Kyte-Doolittle Hydrophobicity Value	-0.048
Molecular Weight (kDa)	23998.1
Isoelectric Point (pI)	5.25

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Analysis not done

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000580 (536 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: Pfl01_5130 Search term: nucleotidyl transferase

Human Homologs

Ensembl 110, assembly GRCh38.p14	ENSP00000311130 GDP-mannose pyrophosphorylase B [Source:HGNC Symbol;Acc:HGNC:22932] E-value: 1.7e-20 Percent Identity: 30.0
Ensembl 110, assembly GRCh38.p14	ENSP00000418565 GDP-mannose pyrophosphorylase B [Source:HGNC Symbol;Acc:HGNC:22932] E-value: 1.7e-20 Percent Identity: 30.0
Ensembl 110, assembly GRCh38.p14	ENSP00000309092 GDP-mannose pyrophosphorylase B [Source:HGNC Symbol;Acc:HGNC:22932] E-value: 1.7e-20 Percent Identity: 30.0

References