Pseudomonas syringae pv. syringae B728a, Psyr_0090

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_0090
Name
Replicon chromosome
Genomic location 98488 - 99768 (- strand)

Cross-References

RefSeq YP_233202.1
GI 66043361
EC Number 2.6.1.19
Entrez 3365565
INSDC AAY35164.1
NCBI Locus Tag Psyr_0090
UniParc UPI0000394F22
UniProtKB Acc Q500K8
UniProtKB ID Q500K8_PSEU2
UniRef100 UniRef100_Q500K8
UniRef50 UniRef50_P22256
UniRef90 UniRef90_G8PZ77

Product

Feature Type CDS
Coding Frame 1
Product Name
4-aminobutyrate aminotransferase
Synonyms
Evidence for Translation
Charge (pH 7) -5.86
Kyte-Doolittle Hydrophobicity Value 0.247
Molecular Weight (kDa) 45.0
Isoelectric Point (pI) 6.02

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 639 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000263 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_0090

Human Homologs

Ensembl 110, assembly GRCh38.p14
ornithine aminotransferase [Source:HGNC Symbol;Acc:HGNC:8091]
E-value: 4.7e-43
Percent Identity: 29.6

References

No references are associated with this feature.