Pseudomonas syringae pv. syringae B728a, Psyr_0678

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_0678
Name
Replicon chromosome
Genomic location 768572 - 769918 (+ strand)

Cross-References

RefSeq YP_233786.1
GI 66043945
EC Number 2.6.1.18
Entrez 3366156
INSDC AAY35748.1
NCBI Locus Tag Psyr_0678
UniParc UPI000039515A
UniProtKB Acc Q4ZYM4
UniProtKB ID Q4ZYM4_PSEU2
UniRef100 UniRef100_Q4ZYM4
UniRef50 UniRef50_Q9I700
UniRef90 UniRef90_Q48D18

Product

Feature Type CDS
Coding Frame 1
Product Name
beta alanine--pyruvate transaminase
Synonyms
Evidence for Translation
Charge (pH 7) -1.54
Kyte-Doolittle Hydrophobicity Value -0.094
Molecular Weight (kDa) 48.8
Isoelectric Point (pI) 6.79

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 639 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000130 (850 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_0678

Human Homologs

Ensembl 110, assembly GRCh38.p14
ornithine aminotransferase [Source:HGNC Symbol;Acc:HGNC:8091]
E-value: 1.2e-36
Percent Identity: 28.0

References

No references are associated with this feature.