Pseudomonas syringae pv. syringae B728a, Psyr_1830

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_1830
Name
Replicon chromosome
Genomic location 2110600 - 2112369 (+ strand)

Cross-References

RefSeq YP_234915.1
GI 66045074
Entrez 3367339
NCBI Locus Tag Psyr_1830

Product

Feature Type CDS
Coding Frame 1
Product Name
ABC transporter, transmembrane region:ABC transporter
Synonyms
Evidence for Translation
Charge (pH 7) 9.11
Kyte-Doolittle Hydrophobicity Value 0.287
Molecular Weight (kDa) 64269.0
Isoelectric Point (pI) 9.75

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001073 (497 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_1830

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 9 [Source:HGNC Symbol;Acc:HGNC:50]
E-value: 1.1e-95
Percent Identity: 37.0
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 9 [Source:HGNC Symbol;Acc:HGNC:50]
E-value: 1.1e-95
Percent Identity: 37.0
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 9 [Source:HGNC Symbol;Acc:HGNC:50]
E-value: 1.1e-95
Percent Identity: 37.0

References

No references are associated with this feature.