Pseudomonas syringae pv. syringae B728a, Psyr_4012

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_4012
Name
Replicon chromosome
Genomic location 4779614 - 4780393 (- strand)

Cross-References

RefSeq YP_237080.1
GI 66047239
EC Number 2.8.3.12
Entrez 3369548
INSDC AAY39042.1
NCBI Locus Tag Psyr_4012
UniParc UPI0000395689
UniProtKB Acc Q4ZP80
UniProtKB ID Q4ZP80_PSEU2
UniRef100 UniRef100_Q4ZP80
UniRef50 UniRef50_G8PXF6
UniRef90 UniRef90_G8PXF6

Product

Feature Type CDS
Coding Frame 1
Product Name
glutaconate CoA-transferase
Synonyms
Evidence for Translation
Charge (pH 7) -5.62
Kyte-Doolittle Hydrophobicity Value 0.137
Molecular Weight (kDa) 27.1
Isoelectric Point (pI) 5.33

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 231 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000226 (497 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_4012

Human Homologs

References

No references are associated with this feature.