Pseudomonas syringae pv. syringae B728a, Psyr_4615

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_4615
Name
Replicon chromosome
Genomic location 5472997 - 5474121 (- strand)

Cross-References

RefSeq YP_237683.1
GI 66047842
Entrez 3370164
INSDC AAY39645.1
NCBI Locus Tag Psyr_4615
UniParc UPI0000395C09
UniProtKB Acc Q4ZMH7
UniProtKB ID Q4ZMH7_PSEU2
UniRef100 UniRef100_Q4ZMH7
UniRef50 UniRef50_B9KZG1
UniRef90 UniRef90_Q88A35

Product

Feature Type CDS
Coding Frame 1
Product Name
spermidine/putrescine ABC transporter ATP-binding subunit
Synonyms
Evidence for Translation
Charge (pH 7) -1.92
Kyte-Doolittle Hydrophobicity Value -0.175
Molecular Weight (kDa) 41.1
Isoelectric Point (pI) 6.71

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000586 (511 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_4615

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]
E-value: 1.0e-20
Percent Identity: 33.3
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]
E-value: 1.0e-20
Percent Identity: 33.3
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 1 [Source:HGNC Symbol;Acc:HGNC:40]
E-value: 1.0e-20
Percent Identity: 33.3

References

No references are associated with this feature.