Pseudomonas syringae pv. syringae B728a, Psyr_4718

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_4718
Name
Replicon chromosome
Genomic location 5591208 - 5592407 (+ strand)

Cross-References

RefSeq YP_237783.1
GI 66047942
Entrez 3370268
INSDC AAY39745.1
NCBI Locus Tag Psyr_4718
UniParc UPI000050DB5D
UniProtKB Acc Q4ZM77
UniProtKB ID Q4ZM77_PSEU2
UniRef100 UniRef100_Q4ZM77
UniRef50 UniRef50_Q52078
UniRef90 UniRef90_Q48CN7

Product

Feature Type CDS
Coding Frame 1
Product Name
zinc-containing alcohol dehydrogenase superfamily protein
Synonyms
Evidence for Translation
Charge (pH 7) -5.32
Kyte-Doolittle Hydrophobicity Value 0.090
Molecular Weight (kDa) 41.8
Isoelectric Point (pI) 6.23

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

PDB 3D Structures

Accession Header Accession Date Compound Source Resolution Method Percent Identity
4JLW OXIDOREDUCTASE 03/13/13 Crystal structure of formaldehyde dehydrogenase from Pseudomonas aeruginosa Pseudomonas aeruginosa 2.7 X-RAY DIFFRACTION 90.0
1KOL OXIDOREDUCTASE 12/21/01 Crystal structure of formaldehyde dehydrogenase Pseudomonas putida 1.65 X-RAY DIFFRACTION 90.5

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 530 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG003315 (1429 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_4718

Human Homologs

References

No references are associated with this feature.