Pseudomonas syringae pv. syringae B728a, Psyr_4750

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Feature Overview

Strain Pseudomonas syringae pv. syringae B728a (Feil et al., 2005)
GCF_000012245.1|latest
Locus Tag
Psyr_4750
Name
Replicon chromosome
Genomic location 5625767 - 5626438 (- strand)

Cross-References

RefSeq YP_237815.1
GI 66047974
Entrez 3370300
INSDC AAY39777.1
NCBI Locus Tag Psyr_4750
UniParc UPI0000395741
UniProtKB Acc Q4ZM45
UniProtKB ID Q4ZM45_PSEU2
UniRef100 UniRef100_F3ECX7
UniRef50 UniRef50_A0A085JP85
UniRef90 UniRef90_Q4K4B9

Product

Feature Type CDS
Coding Frame 1
Product Name
ABC transporter
Synonyms
Evidence for Translation
Charge (pH 7) 8.68
Kyte-Doolittle Hydrophobicity Value -0.014
Molecular Weight (kDa) 24.6
Isoelectric Point (pI) 10.98

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Membrane Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 669 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000365 (534 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: Psyr_4750
Search term: ABC transporter

Human Homologs

Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 6 (Langereis blood group) [Source:HGNC Symbol;Acc:HGNC:47]
E-value: 4.3e-19
Percent Identity: 33.1
Ensembl 110, assembly GRCh38.p14
ATP binding cassette subfamily B member 6 (Langereis blood group) [Source:HGNC Symbol;Acc:HGNC:47]
E-value: 4.3e-19
Percent Identity: 33.1

References

No references are associated with this feature.