Pseudomonas aeruginosa UCBPP-PA14, PA14_05560

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa UCBPP-PA14
GCF_000014625.1|latest
Locus Tag
PA14_05560
Name
Replicon chromosome
Genomic location 492637 - 494556 (- strand)
Transposon Mutants 2 transposon mutants in UCBPP-PA14
Transposon Mutants in orthologs 4 transposon mutants in orthologs

Cross-References

RefSeq YP_788602.1
GI 116054159
Entrez 4384296
INSDC ABJ15395.1
NCBI Locus Tag PA14_05560
UniParc UPI0000E448C5
UniProtKB Acc Q02TY4
UniProtKB ID Q02TY4_PSEAB
UniRef100 UniRef100_Q02TY4
UniRef50 UniRef50_Q4K4H4
UniRef90 UniRef90_Q9I689

Product

Feature Type CDS
Coding Frame 1
Product Name
ATP-dependent RNA helicase
Synonyms
Evidence for Translation
Charge (pH 7) 29.11
Kyte-Doolittle Hydrophobicity Value -0.819
Molecular Weight (kDa) 70.1
Isoelectric Point (pI) 10.65

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 640 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000419 (542 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA14_05560

Human Homologs

Ensembl 97, assembly GRCh38.p12
DEAD-box helicase 27 [Source:HGNC Symbol;Acc:HGNC:15837]
E-value: 2.5e-65
Percent Identity: 43.6

Human Homologs

Ensembl 97, assembly GRCh38.p12
DEAD-box helicase 27 [Source:HGNC Symbol;Acc:HGNC:15837]
E-value: 2.5e-65
Percent Identity: 43.6

Human Homologs

Ensembl 97, assembly GRCh38.p12
DEAD-box helicase 27 [Source:HGNC Symbol;Acc:HGNC:15837]
E-value: 2.5e-65
Percent Identity: 43.6

References

No references are associated with this feature.