Pseudomonas syringae pv. tomato DC3000, PSPTO_0848

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse View in GBrowse

Gene Feature Overview

Strain Pseudomonas syringae pv. tomato DC3000
GCF_000007805.1|latest
Locus Tag
PSPTO_0848
NCBI Old Locus TagPSPTO0848
Name
Synonym: PSPTO0848
Replicon chromosome
Genomic location 916412 - 917785 (- strand)

Cross-References

RefSeq NP_790688.1
GI 28868069
Entrez 1182477
INSDC AAO54383.1
NCBI Locus Tag PSPTO_0848
NCBI Old Locus Tag PSPTO0848
UniParc UPI00000085B7
UniProtKB Acc Q889B3
UniProtKB ID Q889B3_PSESM
UniRef100 UniRef100_Q889B3
UniRef50 UniRef50_Q8GPV2
UniRef90 UniRef90_Q4LBG7

Product

Feature Type CDS
Coding Frame 1
Product Name
hypothetical protein
Synonyms
Evidence for Translation
Charge (pH 7) -0.94
Kyte-Doolittle Hydrophobicity Value -0.254
Molecular Weight (kDa) 47.7
Isoelectric Point (pI) 6.09

Subcellular localization

Individual Mappings
Localization Confidence PMID
Extracellular Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 53 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG017369 (36 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PSPTO_0848

References

No references are associated with this feature.