Pseudomonas syringae pv. tomato DC3000, PSPTO_3033

Gene Feature Overview

Strain	Pseudomonas syringae pv. tomato DC3000 (Buell et al., 2003) GCF_000007805.1|latest
Locus Tag	PSPTO_3033
NCBI Old Locus Tag	PSPTO3033
Name	Synonym: PSPTO3033
Replicon	chromosome
Genomic location	3409902 - 3411077 (- strand)

Cross-References

RefSeq	NP_792828.1
GI	28870209
Entrez	1184690
INSDC	AAO56523.1
NCBI Locus Tag	PSPTO_3033
NCBI Old Locus Tag	PSPTO3033
UniParc	UPI0000008DD9
UniProtKB Acc	Q880W7
UniProtKB ID	Q880W7_PSESM
UniRef100	UniRef100_Q880W7
UniRef50	UniRef50_D7HZG0
UniRef90	UniRef90_D7HZG0

Product

Feature Type	CDS
Coding Frame	1
Product Name	twitching motility protein
Synonyms
Evidence for Translation
Charge (pH 7)	-5.84
Kyte-Doolittle Hydrophobicity Value	-0.161
Molecular Weight (kDa)	42.9
Isoelectric Point (pI)	5.87

Subcellular localization

Individual Mappings	Localization Confidence PMID Cytoplasmic Class 3 20472543
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results

Common Found in both pathogen and nonpathogenic strains Hits to this gene were found in 533 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database	View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group	POG000387 (415 members)
Putative Inparalogs	None Found

Interactions

STRING database

Search for predicted protein-protein interactions using: Search term: PSPTO_3033 Search term: twitching motility protein

Human Homologs

References