Pseudomonas protegens Pf-5, PFL_4430 (cobB)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_4430
Name
cobB
Replicon chromosome
Genomic location 5139178 - 5140518 (- strand)

Cross-References

RefSeq YP_261518.1
GI 70731776
EC Number 6.3.1.-
Entrez 3478549
INSDC AAY93681.1
NCBI Locus Tag PFL_4430
UniParc UPI000054DC3C
UniProtKB Acc Q4K8B5
UniProtKB ID Q4K8B5_PSEF5
UniRef100 UniRef100_Q4K8B5
UniRef50 UniRef50_Q9I471
UniRef90 UniRef90_Q4K8B5

Product

Feature Type CDS
Coding Frame 1
Product Name
cobyrinic acid a,c-diamide synthase
Synonyms
Evidence for Translation
Charge (pH 7) -7.78
Kyte-Doolittle Hydrophobicity Value 0.136
Molecular Weight (kDa) 47.3
Isoelectric Point (pI) 6.01

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 353 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG001220 (531 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_4430
Search term: cobB

Human Homologs

References

No references are associated with this feature.