Pseudomonas protegens Pf-5, PFL_5622 (trpD)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
View in JBrowse

Gene Feature Overview

Strain Pseudomonas protegens Pf-5
GCF_000012265.1|latest
Locus Tag
PFL_5622
Name
trpD
Replicon chromosome
Genomic location 6401650 - 6402699 (- strand)

Cross-References

RefSeq YP_262681.1
GI 70732910
EC Number 2.4.2.18
Entrez 3479997
INSDC AAY94815.1
NCBI Locus Tag PFL_5622
UniParc UPI000054E0B7
UniProtKB Acc Q4K502
UniProtKB ID TRPD_PSEF5
UniRef100 UniRef100_Q4K502
UniRef50 UniRef50_P00500
UniRef90 UniRef90_Q4K502

Product

Feature Type CDS
Coding Frame 1
Product Name
anthranilate phosphoribosyltransferase
Synonyms
Evidence for Translation
Charge (pH 7) -6.47
Kyte-Doolittle Hydrophobicity Value 0.071
Molecular Weight (kDa) 37.1
Isoelectric Point (pI) 5.96

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

AlphaFold 2 Protein Structure Predictions

Protein structure predictions using a neural network model developed by DeepMind. If a UniProtKB accession is associated with this protein, a search link will be provided below.

Look for predicted 3D structure in AlphaFold DB: Search

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 589 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000630 (536 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PFL_5622
Search term: trpD

Human Homologs

References

No references are associated with this feature.