Pseudomonas aeruginosa PAO1, PA0376 (rpoH)

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Feature Overview

Strain Pseudomonas aeruginosa PAO1 (Reference)
GCF_000006765.1|latest
Locus Tag
PA0376
Name
rpoH
Replicon chromosome
Genomic location 420683 - 421537 (+ strand)
Transposon Mutants 1 transposon mutants in PAO1

Cross-References

RefSeq NP_249067.1
GI 15595573
Affymetrix PA0376_rpoH_at
Entrez 883126
GenBank AAG03765.1
INSDC AAG03765.1
NCBI Locus Tag PA0376
protein_id(GenBank) gb|AAG03765.1|AE004475_7|gnl|PseudoCAP|PA0376
TIGR NTL03PA00377
UniParc UPI0000134566
UniProtKB Acc P42378
UniProtKB ID RPOH_PSEAE
UniRef100 UniRef100_P42378
UniRef50 UniRef50_P11539
UniRef90 UniRef90_P42378

Product

Feature Type CDS
Coding Frame 1
Product Name
sigma factor RpoH
Product Name Confidence: Class 1
Synonyms heat-shock sigma factor
Evidence for Translation
Charge (pH 7) -3.34
Kyte-Doolittle Hydrophobicity Value -0.510
Molecular Weight (kDa) 32.6
Isoelectric Point (pI) 6.45

Subcellular localization

Individual Mappings
Localization Confidence PMID
Cytoplasmic Class 3
Additional evidence for subcellular localization

Pathogen Association Analysis

Results
Common
Found in both pathogen and nonpathogenic strains
Hits to this gene were found in 591 genera

Orthologs/Comparative Genomics

Pseudomonas Ortholog Database View orthologs at Pseudomonas Ortholog Database
Pseudomonas Ortholog Group POG000367 (552 members)
Putative Inparalogs None Found

Interactions

STRING database Search for predicted protein-protein interactions using:
Search term: PA0376
Search term: rpoH
Search term: sigma factor RpoH

Human Homologs

References

Cloning and primary sequence of the rpoH gene from Pseudomonas aeruginosa.
Benvenisti L, Koby S, Rutman A, Giladi H, Yura T, Oppenheim AB
Gene 1995 Mar;155(1):73-6
PubMed ID: 7698670