Pseudomonas aeruginosa PAO1, PA0805
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Upstream Motifs
*Up to 500bp upstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| LasR binding site | 883350 | 883365 | - |
|
Details | |
| LasR binding site | 883350 | 883365 | - |
ECO:0000314
direct assay evidence used in manual assertion |
19682264 | Details |
| Shine-Dalgarno sequence | 883227 | 883230 | - |
ECO:0000256
match to sequence model evidence used in automatic assertion |
Details |
Downstream motifs
*Up to 500bp downstream
| Name | Start | Stop | Strand | Evidence | PMID | |
|---|---|---|---|---|---|---|
| AmrZ binding site | 882508 | 882520 | - |
ECO:0000314
direct assay evidence used in manual assertion |
24603766 | Details |
| Inverted repeat: AAAAGCCCCGTC-N3-GACGGGGCTTTT | 882933 | 882959 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
10827456 | Details |
| Rho-independent transcription terminator TERM 200 | 882937 | 882955 | - |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |
| Rho-independent transcription terminator TERM 201 | 882937 | 882955 | + |
ECO:0000246
computational combinatorial evidence used in automatic assertion |
17313685 | Details |