Pseudomonas aeruginosa PAO1, PA1108

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
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Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Cellular Component GO:0005887 integral component of plasma membrane
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07690
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0022857 transmembrane transporter activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR01035
ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0055085 transmembrane transport
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF07690
ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Membrane proteins Other PAO1 genes in this class
Transport of small molecules Other PAO1 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF103473 IPR036259 MFS transporter superfamily 1 382 8.24E-40
CDD cd17320 MFS_MdfA_MDR_like 20 370 4.80731E-69
PRINTS PR01035 Tetracycline resistance protein signature IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG 301 321 7.8E-5
PRINTS PR01035 Tetracycline resistance protein signature IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG 133 155 7.8E-5
PRINTS PR01035 Tetracycline resistance protein signature IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG 246 266 7.8E-5
Pfam PF07690 Major Facilitator Superfamily IPR011701 Major facilitator superfamily 21 350 1.1E-30
ProSiteProfiles PS50850 Major facilitator superfamily (MFS) profile. IPR020846 Major facilitator superfamily domain 8 385 14.908
PRINTS PR01035 Tetracycline resistance protein signature IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG 18 34 7.8E-5
Gene3D G3DSA:1.20.1720.10 9 382 5.0E-64

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.